Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 AC005915.1-201ENST00000624912 2018 ntBASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 AC092053.1-201ENST00000605787 1936 ntBASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 KRT8P10-201ENST00000450021 1447 ntBASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 AL049597.2-201ENST00000565575 961 ntBASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 AC105020.1-201ENST00000435356 2205 ntBASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 AGGF1P2-201ENST00000426656 2106 ntBASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.69■□□□□ 0.26
LRTM1Q9HBL6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 AC246785.2-201ENST00000432512 513 ntBASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 STK25P1-201ENST00000585406 838 ntBASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms