Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 AP000867.4-201ENST00000641616 219 ntBASIC16.6■□□□□ 0.25
BRF2Q9HAW0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
BRF2Q9HAW0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 AL445228.2-201ENST00000605589 952 ntBASIC16.59■□□□□ 0.25
BRF2Q9HAW0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BRF2Q9HAW0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
BRF2Q9HAW0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
BRF2Q9HAW0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BRF2Q9HAW0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
BRF2Q9HAW0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
BRF2Q9HAW0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BRF2Q9HAW0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
BRF2Q9HAW0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 ARMC10P1-201ENST00000313754 855 ntBASIC16.58■□□□□ 0.24
BRF2Q9HAW0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 AL020989.1-201ENST00000422979 469 ntBASIC16.58■□□□□ 0.24
BRF2Q9HAW0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 SIGLEC30P-201ENST00000455569 941 ntBASIC16.58■□□□□ 0.24
BRF2Q9HAW0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BRF2Q9HAW0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.57■□□□□ 0.24
BRF2Q9HAW0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms