Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.92■□□□□ 0.94
RTFDC1Q9BY42 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 AC002472.2-201ENST00000442739 958 ntBASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 RN7SL204P-201ENST00000582831 262 ntBASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.91■□□□□ 0.94
RTFDC1Q9BY42 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 MIR943-201ENST00000401286 94 ntBASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 HMGA1P7-201ENST00000406908 502 ntBASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 AC087641.1-201ENST00000557561 1021 ntBASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 AL161645.1-201ENST00000622716 1255 ntBASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.9■□□□□ 0.94
RTFDC1Q9BY42 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.89■□□□□ 0.94
RTFDC1Q9BY42 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RTFDC1Q9BY42 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTFDC1Q9BY42 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTFDC1Q9BY42 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTFDC1Q9BY42 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTFDC1Q9BY42 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTFDC1Q9BY42 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 AC236430.1-201ENST00000402231 743 ntBASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 KRT8P23-201ENST00000560090 1207 ntBASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTFDC1Q9BY42 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms