Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 PCDHA1-201ENST00000378133 2726 ntBASIC14.11□□□□□ -0.15
RAB40CQ96S21 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.11□□□□□ -0.15
RAB40CQ96S21 SNORA78-201ENST00000459373 127 ntBASIC14.11□□□□□ -0.15
RAB40CQ96S21 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 AC008894.3-201ENST00000624324 3103 ntBASIC14.11□□□□□ -0.15
RAB40CQ96S21 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 AL391005.1-201ENST00000623953 2435 ntBASIC14.1□□□□□ -0.15
RAB40CQ96S21 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 AC124947.2-201ENST00000547118 1133 ntBASIC14.1□□□□□ -0.15
RAB40CQ96S21 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 AC024243.1-201ENST00000609234 778 ntBASIC14.1□□□□□ -0.15
RAB40CQ96S21 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 AL513523.2-202ENST00000427283 2040 ntBASIC14.1□□□□□ -0.15
RAB40CQ96S21 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB40CQ96S21 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB40CQ96S21 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 AC078925.2-201ENST00000624013 1973 ntBASIC14.09□□□□□ -0.15
RAB40CQ96S21 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 PCDHB17P-201ENST00000539533 2393 ntBASIC14.09□□□□□ -0.15
RAB40CQ96S21 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.09□□□□□ -0.15
RAB40CQ96S21 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB40CQ96S21 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB40CQ96S21 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms