Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 RARRES2P10-201ENST00000564312 460 ntBASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 AL109923.1-201ENST00000618799 583 ntBASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 DBET-201ENST00000630918 3363 ntBASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IPQ96QF0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 AC092053.1-201ENST00000605787 1936 ntBASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
RAB3IPQ96QF0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RAB3IPQ96QF0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.96■□□□□ 0.3
RAB3IPQ96QF0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.96■□□□□ 0.3
RAB3IPQ96QF0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.96■□□□□ 0.3
RAB3IPQ96QF0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RAB3IPQ96QF0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RAB3IPQ96QF0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RAB3IPQ96QF0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 AC092364.2-201ENST00000596710 2692 ntBASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 AC004951.3-201ENST00000418645 1148 ntBASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 AC060766.5-201ENST00000590539 871 ntBASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
RAB3IPQ96QF0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms