Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 TMEM14DP-201ENST00000422205 345 ntBASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 AL139099.5-201ENST00000635274 300 ntBASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSMD1Q96PZ7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 AC122714.2-201ENST00000502787 707 ntBASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 CXCL1P1-201ENST00000502804 216 ntBASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 AC099568.2-201ENST00000609194 695 ntBASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 AL138828.2-201ENST00000615812 383 ntBASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 ANO7L1-203ENST00000602586 1720 ntBASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 REXO1L6P-201ENST00000603433 1515 ntBASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 AC069120.2-201ENST00000524091 540 ntBASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.63□□□□□ -0.07
CSMD1Q96PZ7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 MYLKP1-201ENST00000509077 1580 ntBASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 API5-211ENST00000534695 560 ntTSL 5 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 AC003101.2-201ENST00000612557 442 ntBASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 AC135776.1-201ENST00000319817 2481 ntBASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 AC097637.2-201ENST00000624096 1997 ntBASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms