Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 SPDYE10P-202ENST00000612005 668 ntBASIC18.37■□□□□ 0.53
CASD1Q96PB1 SPDYE8P-202ENST00000612377 668 ntBASIC18.37■□□□□ 0.53
CASD1Q96PB1 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 AL354751.1-201ENST00000412768 1863 ntBASIC18.37■□□□□ 0.53
CASD1Q96PB1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 HMGA1P7-201ENST00000406908 502 ntBASIC18.36■□□□□ 0.53
CASD1Q96PB1 TFAMP1-201ENST00000412727 736 ntBASIC18.36■□□□□ 0.53
CASD1Q96PB1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 AC243562.1-201ENST00000560672 389 ntBASIC18.36■□□□□ 0.53
CASD1Q96PB1 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CASD1Q96PB1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.36■□□□□ 0.53
CASD1Q96PB1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 AL355312.1-201ENST00000407115 2176 ntBASIC18.35■□□□□ 0.53
CASD1Q96PB1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.35■□□□□ 0.53
CASD1Q96PB1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 AC079140.1-201ENST00000508039 487 ntBASIC18.35■□□□□ 0.53
CASD1Q96PB1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CASD1Q96PB1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CASD1Q96PB1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.34■□□□□ 0.53
CASD1Q96PB1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.34■□□□□ 0.53
CASD1Q96PB1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.34■□□□□ 0.53
CASD1Q96PB1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CASD1Q96PB1 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.34■□□□□ 0.53
CASD1Q96PB1 AC005237.2-201ENST00000434368 219 ntBASIC18.34■□□□□ 0.53
CASD1Q96PB1 SLC25A6P5-201ENST00000435663 894 ntBASIC18.34■□□□□ 0.53
CASD1Q96PB1 AL592309.1-201ENST00000443127 649 ntBASIC18.34■□□□□ 0.53
CASD1Q96PB1 BCRP1-201ENST00000444246 691 ntBASIC18.34■□□□□ 0.53
CASD1Q96PB1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms