Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CALR3Q96L12 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.37■□□□□ 0.53
CALR3Q96L12 KRT18P38-201ENST00000449496 1282 ntBASIC18.37■□□□□ 0.53
CALR3Q96L12 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 AC073912.3-201ENST00000624414 853 ntBASIC18.37■□□□□ 0.53
CALR3Q96L12 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CALR3Q96L12 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.37■□□□□ 0.53
CALR3Q96L12 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CALR3Q96L12 AL049757.1-201ENST00000616842 1596 ntBASIC18.37■□□□□ 0.53
CALR3Q96L12 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
CALR3Q96L12 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CALR3Q96L12 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CALR3Q96L12 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.36■□□□□ 0.53
CALR3Q96L12 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.36■□□□□ 0.53
CALR3Q96L12 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.36■□□□□ 0.53
CALR3Q96L12 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.36■□□□□ 0.53
CALR3Q96L12 EGFEM1P-202ENST00000431685 1563 ntBASIC18.36■□□□□ 0.53
CALR3Q96L12 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 RN7SL606P-201ENST00000472779 293 ntBASIC18.36■□□□□ 0.53
CALR3Q96L12 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.36■□□□□ 0.53
CALR3Q96L12 VENTXP5-201ENST00000523979 775 ntBASIC18.36■□□□□ 0.53
CALR3Q96L12 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.36■□□□□ 0.53
CALR3Q96L12 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 RNF126P1-202ENST00000569893 925 ntBASIC18.36■□□□□ 0.53
CALR3Q96L12 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CALR3Q96L12 AC090616.6-201ENST00000582640 721 ntBASIC18.36■□□□□ 0.53
CALR3Q96L12 STK25P1-201ENST00000585406 838 ntBASIC18.36■□□□□ 0.53
CALR3Q96L12 AL138831.2-201ENST00000606564 490 ntBASIC18.36■□□□□ 0.53
CALR3Q96L12 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.36■□□□□ 0.53
CALR3Q96L12 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.36■□□□□ 0.53
CALR3Q96L12 AC133561.5-201ENST00000635547 218 ntBASIC18.36■□□□□ 0.53
CALR3Q96L12 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.36■□□□□ 0.53
CALR3Q96L12 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CALR3Q96L12 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.36■□□□□ 0.53
CALR3Q96L12 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.35■□□□□ 0.53
CALR3Q96L12 AC005915.1-201ENST00000624912 2018 ntBASIC18.35■□□□□ 0.53
CALR3Q96L12 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.35■□□□□ 0.53
CALR3Q96L12 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.35■□□□□ 0.53
CALR3Q96L12 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.35■□□□□ 0.53
CALR3Q96L12 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.35■□□□□ 0.53
CALR3Q96L12 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.35■□□□□ 0.53
CALR3Q96L12 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CALR3Q96L12 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CALR3Q96L12 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CALR3Q96L12 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALR3Q96L12 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms