Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 AL355355.2-201ENST00000442321 338 ntBASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 AL365203.3-201ENST00000609742 2057 ntBASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.69■□□□□ 0.26
CLPTM1LQ96KA5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 CRYGFP-201ENST00000418459 633 ntBASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 BX276092.7-203ENST00000637198 1536 ntBASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLPTM1LQ96KA5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLPTM1LQ96KA5 AL136379.1-201ENST00000623471 2642 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms