Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 AC096582.2-201ENST00000510860 516 ntBASIC18.36■□□□□ 0.53
TRIM11Q96F44 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 AC073592.5-201ENST00000624854 528 ntBASIC18.36■□□□□ 0.53
TRIM11Q96F44 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM11Q96F44 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM11Q96F44 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 AC132938.5-201ENST00000624980 1813 ntBASIC18.35■□□□□ 0.53
TRIM11Q96F44 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 LINC00265-3P-201ENST00000447588 903 ntBASIC18.35■□□□□ 0.53
TRIM11Q96F44 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 INTS4P1-201ENST00000438455 1935 ntBASIC18.35■□□□□ 0.53
TRIM11Q96F44 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM11Q96F44 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM11Q96F44 AL135999.2-201ENST00000622438 1686 ntBASIC18.34■□□□□ 0.53
TRIM11Q96F44 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 BNIP3P18-201ENST00000593976 575 ntBASIC18.34■□□□□ 0.53
TRIM11Q96F44 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 AC114341.1-201ENST00000618070 349 ntBASIC18.34■□□□□ 0.53
TRIM11Q96F44 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM11Q96F44 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM11Q96F44 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM11Q96F44 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM11Q96F44 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM11Q96F44 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM11Q96F44 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms