Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 AC034105.1-201ENST00000563488 319 ntBASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 AC104109.2-201ENST00000602919 1418 ntBASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 PAWRP1-201ENST00000451083 565 ntBASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 AF228730.7-201ENST00000641842 219 ntBASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 EGFEM1P-202ENST00000431685 1563 ntBASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ECHDC3Q96DC8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ECHDC3Q96DC8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ECHDC3Q96DC8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms