Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.95■□□□□ 0.14
HPS1Q92902 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.95■□□□□ 0.14
HPS1Q92902 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.95■□□□□ 0.14
HPS1Q92902 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.95■□□□□ 0.14
HPS1Q92902 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
HPS1Q92902 MYC-208ENST00000641036 567 ntBASIC15.95■□□□□ 0.14
HPS1Q92902 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HPS1Q92902 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.95■□□□□ 0.14
HPS1Q92902 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HPS1Q92902 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
HPS1Q92902 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HPS1Q92902 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HPS1Q92902 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HPS1Q92902 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
HPS1Q92902 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HPS1Q92902 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
HPS1Q92902 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.94■□□□□ 0.14
HPS1Q92902 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
HPS1Q92902 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HPS1Q92902 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.94■□□□□ 0.14
HPS1Q92902 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.94■□□□□ 0.14
HPS1Q92902 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
HPS1Q92902 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HPS1Q92902 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.94■□□□□ 0.14
HPS1Q92902 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HPS1Q92902 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
HPS1Q92902 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HPS1Q92902 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.94■□□□□ 0.14
HPS1Q92902 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.94■□□□□ 0.14
HPS1Q92902 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.94■□□□□ 0.14
HPS1Q92902 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.94■□□□□ 0.14
HPS1Q92902 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.94■□□□□ 0.14
HPS1Q92902 AC140113.3-201ENST00000605663 199 ntBASIC15.94■□□□□ 0.14
HPS1Q92902 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.94■□□□□ 0.14
HPS1Q92902 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
HPS1Q92902 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.94■□□□□ 0.14
HPS1Q92902 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.94■□□□□ 0.14
HPS1Q92902 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HPS1Q92902 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.94■□□□□ 0.14
HPS1Q92902 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HPS1Q92902 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HPS1Q92902 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HPS1Q92902 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HPS1Q92902 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HPS1Q92902 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HPS1Q92902 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.93■□□□□ 0.14
HPS1Q92902 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HPS1Q92902 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms