Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PMS2P7-201ENST00000506558 1336 ntBASIC18.47■□□□□ 0.55
DDX1Q92499 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX1Q92499 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.47■□□□□ 0.55
DDX1Q92499 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX1Q92499 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX1Q92499 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX1Q92499 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX1Q92499 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX1Q92499 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
DDX1Q92499 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.46■□□□□ 0.55
DDX1Q92499 SPDYE21P-201ENST00000413323 827 ntBASIC18.46■□□□□ 0.55
DDX1Q92499 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX1Q92499 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX1Q92499 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
DDX1Q92499 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.46■□□□□ 0.55
DDX1Q92499 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX1Q92499 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DDX1Q92499 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
DDX1Q92499 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.46■□□□□ 0.55
DDX1Q92499 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.46■□□□□ 0.55
DDX1Q92499 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DDX1Q92499 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
DDX1Q92499 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
DDX1Q92499 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
DDX1Q92499 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
DDX1Q92499 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
DDX1Q92499 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX1Q92499 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 BX842568.4-201ENST00000421222 227 ntBASIC18.45■□□□□ 0.54
DDX1Q92499 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.45■□□□□ 0.54
DDX1Q92499 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.45■□□□□ 0.54
DDX1Q92499 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.45■□□□□ 0.54
DDX1Q92499 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 AC138894.3-201ENST00000603787 634 ntBASIC18.45■□□□□ 0.54
DDX1Q92499 AC073592.4-201ENST00000623827 446 ntBASIC18.45■□□□□ 0.54
DDX1Q92499 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
DDX1Q92499 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.45■□□□□ 0.54
DDX1Q92499 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX1Q92499 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
DDX1Q92499 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX1Q92499 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX1Q92499 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX1Q92499 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX1Q92499 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 EGFEM1P-202ENST00000431685 1563 ntBASIC18.44■□□□□ 0.54
DDX1Q92499 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 SIGLEC16-201ENST00000599858 1437 ntBASIC18.44■□□□□ 0.54
DDX1Q92499 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX1Q92499 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.44■□□□□ 0.54
DDX1Q92499 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX1Q92499 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX1Q92499 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX1Q92499 SAPCD2P3-201ENST00000455031 850 ntBASIC18.44■□□□□ 0.54
DDX1Q92499 AC093909.1-201ENST00000504731 1122 ntBASIC18.44■□□□□ 0.54
DDX1Q92499 RNPS1P1-201ENST00000507437 918 ntBASIC18.44■□□□□ 0.54
DDX1Q92499 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.44■□□□□ 0.54
DDX1Q92499 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX1Q92499 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 LINC02084-201ENST00000606069 1096 ntBASIC18.44■□□□□ 0.54
DDX1Q92499 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX1Q92499 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX1Q92499 AL773604.1-201ENST00000617417 272 ntBASIC18.44■□□□□ 0.54
DDX1Q92499 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX1Q92499 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
DDX1Q92499 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX1Q92499 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms