Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 REXO1L11P-201ENST00000620964 1927 ntBASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 AL590560.3-201ENST00000623350 461 ntBASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 AC008738.7-201ENST00000609744 511 ntBASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 AC012569.1-201ENST00000591191 1524 ntBASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC11.52□□□□□ -0.57
ALMS1Q8TCU4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 AC098614.1-201ENST00000368528 745 ntBASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 AC008735.3-201ENST00000596646 500 ntBASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 AC099568.2-201ENST00000609194 695 ntBASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 HCG4-201ENST00000418983 998 ntBASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 CHCHD2P3-201ENST00000603038 451 ntBASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 AC018529.1-201ENST00000613063 361 ntBASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ALMS1Q8TCU4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 ZNF890P-202ENST00000530367 1156 ntBASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.5□□□□□ -0.57
ALMS1Q8TCU4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms