Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC148Q8NFR7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC148Q8NFR7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC148Q8NFR7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC148Q8NFR7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC148Q8NFR7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC148Q8NFR7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC148Q8NFR7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC148Q8NFR7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20■□□□□ 0.79
CCDC148Q8NFR7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 CROCCP2-202ENST00000412962 2773 ntBASIC20■□□□□ 0.79
CCDC148Q8NFR7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 HIST2H3DP1-201ENST00000401004 416 ntBASIC20■□□□□ 0.79
CCDC148Q8NFR7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20■□□□□ 0.79
CCDC148Q8NFR7 PRYP5-201ENST00000451909 266 ntBASIC20■□□□□ 0.79
CCDC148Q8NFR7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20■□□□□ 0.79
CCDC148Q8NFR7 BX005266.1-201ENST00000473402 457 ntBASIC20■□□□□ 0.79
CCDC148Q8NFR7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20■□□□□ 0.79
CCDC148Q8NFR7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC148Q8NFR7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20■□□□□ 0.79
CCDC148Q8NFR7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 AL121912.1-201ENST00000603683 238 ntBASIC20■□□□□ 0.79
CCDC148Q8NFR7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC148Q8NFR7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20■□□□□ 0.79
CCDC148Q8NFR7 AC139713.2-201ENST00000641328 2723 ntBASIC20■□□□□ 0.79
CCDC148Q8NFR7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC148Q8NFR7 AL135999.2-201ENST00000622438 1686 ntBASIC20■□□□□ 0.79
CCDC148Q8NFR7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 SART3-203ENST00000546611 1184 ntBASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 PRORSD1P-202ENST00000563365 2154 ntBASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 PP12613-201ENST00000424958 2230 ntBASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC148Q8NFR7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 AL023806.1-201ENST00000603994 1649 ntBASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC148Q8NFR7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 AC012313.1-201ENST00000593393 3059 ntBASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC148Q8NFR7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms