Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 AC122714.2-201ENST00000502787 707 ntBASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SIMC1Q8NDZ2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 MIR3652-201ENST00000579335 131 ntBASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 MIR5100-201ENST00000579544 119 ntBASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 AC114341.1-201ENST00000618070 349 ntBASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 AL691432.3-201ENST00000621860 400 ntBASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 AL138688.1-201ENST00000624851 1594 ntBASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIMC1Q8NDZ2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 AL732292.2-201ENST00000609649 430 ntBASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.37■□□□□ 0.21
SIMC1Q8NDZ2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms