Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 AC027369.6-201ENST00000525520 931 ntBASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 AC068587.10-201ENST00000641210 219 ntBASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 AC126763.1-201ENST00000552015 2118 ntBASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 AC093010.1-201ENST00000473625 1624 ntBASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 AC104794.3-201ENST00000566840 1248 ntBASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCDC168Q8NDH2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 AC009477.1-201ENST00000452936 217 ntBASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 AC140912.1-201ENST00000577171 1054 ntBASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 SPCS2P4-201ENST00000436160 681 ntBASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCDC168Q8NDH2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC168Q8NDH2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms