Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 SLC25A1P3-201ENST00000395415 828 ntBASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDRT4Q8N9R6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 AC073592.4-201ENST00000623827 446 ntBASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDRT4Q8N9R6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 AP005117.1-201ENST00000584346 1413 ntBASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 AC132008.2-207ENST00000454517 770 ntBASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 PRELID1P1-202ENST00000567272 903 ntBASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.11■□□□□ 0.17
CDRT4Q8N9R6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms