Protein–RNA interactions for Protein: Q8N5U1

MS4A15, Membrane-spanning 4-domains subfamily A member 15, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A15Q8N5U1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 AP000523.1-201ENST00000398242 1049 ntBASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 AC128688.1-201ENST00000487626 519 ntBASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 CD99P1-205ENST00000527459 561 ntBASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 EGLN1P1-201ENST00000531623 762 ntBASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 AL157888.1-201ENST00000631930 593 ntBASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 AC026691.1-201ENST00000602502 2017 ntBASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MS4A15Q8N5U1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 AC092053.1-201ENST00000605787 1936 ntBASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 AC006449.5-201ENST00000610658 2098 ntBASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 CYP2T1P-202ENST00000641596 2535 ntBASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 AC078925.2-201ENST00000624013 1973 ntBASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MS4A15Q8N5U1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MS4A15Q8N5U1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms