Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC82Q8N4S0 LTB4R2-202ENST00000528054 3092 ntBASIC20.25■□□□□ 0.83
CCDC82Q8N4S0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC82Q8N4S0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CCDC82Q8N4S0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC82Q8N4S0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 AL121912.1-201ENST00000603683 238 ntBASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC82Q8N4S0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC82Q8N4S0 AL135999.2-201ENST00000622438 1686 ntBASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 TPM4P1-201ENST00000436100 807 ntBASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC82Q8N4S0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 FAM197Y8-203ENST00000450145 560 ntBASIC20.21■□□□□ 0.83
CCDC82Q8N4S0 SIGLEC30P-201ENST00000455569 941 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms