Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
HERC6Q8IVU3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 AL355306.1-201ENST00000415580 579 ntBASIC18.7■□□□□ 0.58
HERC6Q8IVU3 AC005237.2-201ENST00000434368 219 ntBASIC18.7■□□□□ 0.58
HERC6Q8IVU3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 WIZP1-201ENST00000531444 2299 ntBASIC18.7■□□□□ 0.58
HERC6Q8IVU3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERC6Q8IVU3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 CNN2P2-201ENST00000443536 909 ntBASIC18.69■□□□□ 0.58
HERC6Q8IVU3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 CNN2P3-201ENST00000450201 906 ntBASIC18.69■□□□□ 0.58
HERC6Q8IVU3 AC002558.1-201ENST00000488906 803 ntBASIC18.69■□□□□ 0.58
HERC6Q8IVU3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 FAM86C2P-203ENST00000528684 1004 ntBASIC18.69■□□□□ 0.58
HERC6Q8IVU3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 AL136317.3-201ENST00000618497 906 ntBASIC18.69■□□□□ 0.58
HERC6Q8IVU3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERC6Q8IVU3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.68■□□□□ 0.58
HERC6Q8IVU3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 AC009949.1-201ENST00000623048 1830 ntBASIC18.68■□□□□ 0.58
HERC6Q8IVU3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 ACTG1P4-201ENST00000425123 1122 ntBASIC18.68■□□□□ 0.58
HERC6Q8IVU3 AL671277.1-201ENST00000429656 993 ntBASIC18.68■□□□□ 0.58
HERC6Q8IVU3 BASP1P1-201ENST00000430708 665 ntBASIC18.68■□□□□ 0.58
HERC6Q8IVU3 AC055876.3-201ENST00000431496 288 ntBASIC18.68■□□□□ 0.58
HERC6Q8IVU3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 KRT8P48-201ENST00000515599 1220 ntBASIC18.68■□□□□ 0.58
HERC6Q8IVU3 AC087641.1-201ENST00000557561 1021 ntBASIC18.68■□□□□ 0.58
HERC6Q8IVU3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 AC138649.4-201ENST00000612222 287 ntBASIC18.68■□□□□ 0.58
HERC6Q8IVU3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.68■□□□□ 0.58
HERC6Q8IVU3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms