Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 KRT18P1-202ENST00000452408 1331 ntBASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC00346Q8IVM7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 MYCLP1-201ENST00000372451 1075 ntBASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 FAM220CP-201ENST00000395253 831 ntBASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 VENTXP7-201ENST00000475503 772 ntBASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 AP005901.3-202ENST00000581653 237 ntBASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00346Q8IVM7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 KRT8P10-201ENST00000450021 1447 ntBASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 AL121761.2-201ENST00000598007 1648 ntBASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 PCED1CP-201ENST00000419887 785 ntBASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 AC122714.2-201ENST00000502787 707 ntBASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 AC111152.3-201ENST00000569699 673 ntBASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 AC116407.4-201ENST00000623319 1061 ntBASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 AC046185.3-201ENST00000623228 1824 ntBASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00346Q8IVM7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 AL049757.1-201ENST00000616842 1596 ntBASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LINC00346Q8IVM7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms