Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS4Q8IUM7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NPAS4Q8IUM7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS4Q8IUM7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPAS4Q8IUM7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NPAS4Q8IUM7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 ABALON-201ENST00000629058 1903 ntBASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 AL592309.1-201ENST00000443127 649 ntBASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPAS4Q8IUM7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 LINC00304-203ENST00000565008 1864 ntBASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 TFAMP1-201ENST00000412727 736 ntBASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 AC079140.1-201ENST00000508039 487 ntBASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 Z92544.3-201ENST00000624747 417 ntBASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NPAS4Q8IUM7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
NPAS4Q8IUM7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NPAS4Q8IUM7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.46■□□□□ 0.54
NPAS4Q8IUM7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NPAS4Q8IUM7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 AL135744.1-201ENST00000565098 629 ntBASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 RARRES2P8-201ENST00000566335 367 ntBASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 AKAP8P1-201ENST00000434743 1349 ntBASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 BCL2-203ENST00000589955 5011 ntBASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS4Q8IUM7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms