Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 AC092329.2-201ENST00000598402 547 ntBASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 AP000867.4-201ENST00000641616 219 ntBASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.43■■□□□ 1.02
CHD1LQ86WJ1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 ATP5G2P1-201ENST00000433580 426 ntBASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 AC124067.4-201ENST00000519691 2379 ntBASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 AC124947.2-201ENST00000547118 1133 ntBASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 AL445228.2-201ENST00000605589 952 ntBASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 AC092119.3-201ENST00000612618 583 ntBASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 FLJ38576-201ENST00000623820 2459 ntBASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 AC148477.5-201ENST00000625164 1645 ntBASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHD1LQ86WJ1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 POM121L3P-201ENST00000419331 1163 ntBASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 AC104819.1-201ENST00000504587 486 ntBASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD1LQ86WJ1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 AC012615.1-201ENST00000565797 1299 ntBASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 AC091076.1-201ENST00000610741 619 ntBASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD1LQ86WJ1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms