Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 AC005237.2-201ENST00000434368 219 ntBASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 AL592309.1-201ENST00000443127 649 ntBASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 DUX4L17-201ENST00000557360 1267 ntBASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RTN4RL1Q86UN2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 AL354751.1-201ENST00000412768 1863 ntBASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 DUX4L27-201ENST00000554796 1261 ntBASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RTN4RL1Q86UN2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 AL035633.1-201ENST00000406139 838 ntBASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 AC015911.4-201ENST00000588022 1070 ntBASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 Z92544.3-201ENST00000624747 417 ntBASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RTN4RL1Q86UN2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 GPS2P2-201ENST00000430745 888 ntBASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 AC069335.1-201ENST00000489972 472 ntBASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 LINC01225-203ENST00000563550 1244 ntBASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 AL135744.1-201ENST00000565098 629 ntBASIC18.48■□□□□ 0.55
RTN4RL1Q86UN2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms