Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC25.6■■□□□ 1.69
CCDC141Q6ZP82 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC141Q6ZP82 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC141Q6ZP82 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CCDC141Q6ZP82 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC25.6■■□□□ 1.69
CCDC141Q6ZP82 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC25.6■■□□□ 1.69
CCDC141Q6ZP82 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 UGT1A2P-201ENST00000454886 866 ntBASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 RNA5SP421-201ENST00000516864 134 ntBASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 AC087641.1-201ENST00000557561 1021 ntBASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 AL158211.3-201ENST00000607385 239 ntBASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCDC141Q6ZP82 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 AL355312.1-201ENST00000407115 2176 ntBASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CCDC141Q6ZP82 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC25.58■■□□□ 1.68
CCDC141Q6ZP82 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 MIR943-201ENST00000401286 94 ntBASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 TREML5P-201ENST00000421694 576 ntBASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 PNKD-204ENST00000436005 978 ntTSL 5 BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 AC008677.1-201ENST00000519230 1561 ntBASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 SSH2-211ENST00000590153 570 ntTSL 4 BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CCDC141Q6ZP82 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 FO538757.1-201ENST00000623083 1397 ntBASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 SLC25A6P5-201ENST00000435663 894 ntBASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 AP000842.3-202ENST00000569238 1080 ntBASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CCDC141Q6ZP82 AC012317.2-201ENST00000623305 2251 ntBASIC25.55■■□□□ 1.68
CCDC141Q6ZP82 AC004408.2-201ENST00000623613 2777 ntBASIC25.55■■□□□ 1.68
CCDC141Q6ZP82 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC25.55■■□□□ 1.68
CCDC141Q6ZP82 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC141Q6ZP82 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC141Q6ZP82 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CCDC141Q6ZP82 AC236430.1-201ENST00000402231 743 ntBASIC25.55■■□□□ 1.68
CCDC141Q6ZP82 BASP1P1-201ENST00000430708 665 ntBASIC25.55■■□□□ 1.68
CCDC141Q6ZP82 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms