Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AL031284.1-201ENST00000419297 478 ntBASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 MIR5100-201ENST00000579544 119 ntBASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 AL353593.2-201ENST00000602529 1483 ntBASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.41■□□□□ 0.7
HERC4Q5GLZ8 LTB4R2-202ENST00000528054 3092 ntBASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 FAM197Y8-203ENST00000450145 560 ntBASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 AL139424.1-201ENST00000607572 797 ntBASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERC4Q5GLZ8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HERC4Q5GLZ8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.39■□□□□ 0.7
HERC4Q5GLZ8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 AL691403.2-201ENST00000618460 490 ntBASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 AD001527.2-201ENST00000622994 785 ntBASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HERC4Q5GLZ8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 KRT18P67-201ENST00000432816 1264 ntBASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 AC093909.1-201ENST00000504731 1122 ntBASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.38■□□□□ 0.69
HERC4Q5GLZ8 STK25P1-201ENST00000585406 838 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms