Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 NUS1P1-201ENST00000446295 882 ntBASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 AC096582.2-201ENST00000510860 516 ntBASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 PRELID1P1-202ENST00000567272 903 ntBASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.61■□□□□ 0.41
KHDC1Q4VXA5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 NUS1P2-201ENST00000417358 873 ntBASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 AC096633.1-201ENST00000422446 749 ntBASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 AC007967.3-201ENST00000434308 558 ntBASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 TP73-AS1-210ENST00000637775 1455 ntBASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KHDC1Q4VXA5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 RCN1P2-201ENST00000398357 915 ntBASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 UNC93B7-201ENST00000509439 705 ntBASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 AL596257.1-201ENST00000641463 2694 ntBASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KHDC1Q4VXA5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms