Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 FAM86MP-201ENST00000340703 885 ntBASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 AC022210.1-201ENST00000449856 793 ntBASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 RN7SL752P-201ENST00000463779 287 ntBASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 AC132938.2-201ENST00000579188 680 ntBASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 AL591163.1-201ENST00000641757 987 ntBASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 AL590787.1-201ENST00000568856 1315 ntBASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RSPO4Q2I0M5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 AC009336.1-201ENST00000608941 1553 ntBASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 AL353779.1-201ENST00000434793 351 ntBASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 REXO1L6P-201ENST00000603433 1515 ntBASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 TNXA-203ENST00000507684 2038 ntBASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 AC129492.6-201ENST00000611383 1305 ntBASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.68■□□□□ 0.26
RSPO4Q2I0M5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 AP006294.1-201ENST00000415407 339 ntBASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 API5-211ENST00000534695 560 ntTSL 5 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.67■□□□□ 0.26
RSPO4Q2I0M5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 AC093503.3-201ENST00000624917 2352 ntBASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO4Q2I0M5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms