Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CDK3Q00526 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDK3Q00526 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK3Q00526 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.03■□□□□ 0.32
CDK3Q00526 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK3Q00526 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CDK3Q00526 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.03■□□□□ 0.32
CDK3Q00526 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK3Q00526 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK3Q00526 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK3Q00526 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK3Q00526 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
CDK3Q00526 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.03■□□□□ 0.32
CDK3Q00526 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 AC064836.3-201ENST00000607928 673 ntBASIC17.03■□□□□ 0.32
CDK3Q00526 GGTLC5P-201ENST00000617623 998 ntBASIC17.03■□□□□ 0.32
CDK3Q00526 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CDK3Q00526 PI4KAP1-204ENST00000612579 1703 ntBASIC17.03■□□□□ 0.32
CDK3Q00526 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK3Q00526 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDK3Q00526 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CDK3Q00526 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK3Q00526 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK3Q00526 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDK3Q00526 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDK3Q00526 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK3Q00526 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK3Q00526 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK3Q00526 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK3Q00526 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK3Q00526 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDK3Q00526 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK3Q00526 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK3Q00526 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK3Q00526 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDK3Q00526 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK3Q00526 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK3Q00526 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDK3Q00526 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK3Q00526 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
CDK3Q00526 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDK3Q00526 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK3Q00526 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDK3Q00526 CRYGEP-201ENST00000412192 528 ntBASIC17.02■□□□□ 0.32
CDK3Q00526 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDK3Q00526 PRSS29P-201ENST00000440800 595 ntBASIC17.02■□□□□ 0.32
CDK3Q00526 RNA5SP416-201ENST00000516838 111 ntBASIC17.02■□□□□ 0.32
CDK3Q00526 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK3Q00526 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.02■□□□□ 0.32
CDK3Q00526 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK3Q00526 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.02■□□□□ 0.32
CDK3Q00526 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK3Q00526 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDK3Q00526 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.02■□□□□ 0.32
CDK3Q00526 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK3Q00526 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.02■□□□□ 0.31
CDK3Q00526 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDK3Q00526 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
CDK3Q00526 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
CDK3Q00526 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CDK3Q00526 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.02■□□□□ 0.31
CDK3Q00526 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.02■□□□□ 0.31
CDK3Q00526 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
CDK3Q00526 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK3Q00526 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.02■□□□□ 0.31
CDK3Q00526 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDK3Q00526 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDK3Q00526 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDK3Q00526 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK3Q00526 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK3Q00526 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.01■□□□□ 0.31
CDK3Q00526 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK3Q00526 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK3Q00526 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK3Q00526 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CDK3Q00526 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK3Q00526 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK3Q00526 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDK3Q00526 MRPL20P1-201ENST00000400819 433 ntBASIC17.01■□□□□ 0.31
CDK3Q00526 VN2R19P-201ENST00000442399 1052 ntBASIC17.01■□□□□ 0.31
CDK3Q00526 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.01■□□□□ 0.31
CDK3Q00526 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.01■□□□□ 0.31
CDK3Q00526 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.01■□□□□ 0.31
CDK3Q00526 PGAM5P1-201ENST00000518923 814 ntBASIC17.01■□□□□ 0.31
CDK3Q00526 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK3Q00526 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CDK3Q00526 AC010654.1-201ENST00000615722 808 ntBASIC17.01■□□□□ 0.31
CDK3Q00526 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.01■□□□□ 0.31
CDK3Q00526 AC023511.2-201ENST00000618803 211 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms