Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.53■□□□□ 0.4
PRAMEP78395 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.53■□□□□ 0.4
PRAMEP78395 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
PRAMEP78395 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PRAMEP78395 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PRAMEP78395 KRT17P6-201ENST00000453795 1220 ntBASIC17.53■□□□□ 0.4
PRAMEP78395 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.53■□□□□ 0.4
PRAMEP78395 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEP78395 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.53■□□□□ 0.4
PRAMEP78395 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.53■□□□□ 0.4
PRAMEP78395 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PRAMEP78395 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.53■□□□□ 0.4
PRAMEP78395 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEP78395 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEP78395 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEP78395 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PRAMEP78395 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEP78395 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEP78395 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRAMEP78395 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEP78395 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEP78395 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEP78395 TP73-AS1-210ENST00000637775 1455 ntBASIC17.52■□□□□ 0.4
PRAMEP78395 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PRAMEP78395 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEP78395 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEP78395 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEP78395 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEP78395 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEP78395 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEP78395 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEP78395 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.52■□□□□ 0.4
PRAMEP78395 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PRAMEP78395 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRAMEP78395 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PRAMEP78395 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEP78395 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.52■□□□□ 0.4
PRAMEP78395 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEP78395 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEP78395 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEP78395 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEP78395 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.52■□□□□ 0.39
PRAMEP78395 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEP78395 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.52■□□□□ 0.39
PRAMEP78395 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEP78395 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PRAMEP78395 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEP78395 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
PRAMEP78395 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEP78395 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PRAMEP78395 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.51■□□□□ 0.39
PRAMEP78395 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.51■□□□□ 0.39
PRAMEP78395 AC104819.1-201ENST00000504587 486 ntBASIC17.51■□□□□ 0.39
PRAMEP78395 AC096582.2-201ENST00000510860 516 ntBASIC17.51■□□□□ 0.39
PRAMEP78395 AP000867.3-201ENST00000524675 377 ntBASIC17.51■□□□□ 0.39
PRAMEP78395 AC074051.2-201ENST00000565115 352 ntBASIC17.51■□□□□ 0.39
PRAMEP78395 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.51■□□□□ 0.39
PRAMEP78395 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.51■□□□□ 0.39
PRAMEP78395 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 AC011467.2-201ENST00000598425 242 ntBASIC17.51■□□□□ 0.39
PRAMEP78395 AL049757.1-201ENST00000616842 1596 ntBASIC17.51■□□□□ 0.39
PRAMEP78395 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.51■□□□□ 0.39
PRAMEP78395 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEP78395 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PRAMEP78395 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
PRAMEP78395 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms