Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2DP55273 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKN2DP55273 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2DP55273 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2DP55273 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2DP55273 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2DP55273 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2DP55273 PMPCAP1-201ENST00000508114 1576 ntBASIC17.15■□□□□ 0.34
CDKN2DP55273 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2DP55273 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKN2DP55273 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDKN2DP55273 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDKN2DP55273 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CDKN2DP55273 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDKN2DP55273 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKN2DP55273 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDKN2DP55273 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDKN2DP55273 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.14■□□□□ 0.33
CDKN2DP55273 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.14■□□□□ 0.33
CDKN2DP55273 ATP5G2P1-201ENST00000433580 426 ntBASIC17.14■□□□□ 0.33
CDKN2DP55273 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKN2DP55273 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.14■□□□□ 0.33
CDKN2DP55273 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 AC092329.2-201ENST00000598402 547 ntBASIC17.14■□□□□ 0.33
CDKN2DP55273 AC010331.1-201ENST00000611423 582 ntBASIC17.14■□□□□ 0.33
CDKN2DP55273 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKN2DP55273 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CDKN2DP55273 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 EGFEM1P-202ENST00000431685 1563 ntBASIC17.14■□□□□ 0.33
CDKN2DP55273 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKN2DP55273 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKN2DP55273 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKN2DP55273 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 AC092068.3-201ENST00000587894 2016 ntBASIC17.13■□□□□ 0.33
CDKN2DP55273 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDKN2DP55273 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKN2DP55273 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.13■□□□□ 0.33
CDKN2DP55273 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKN2DP55273 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 AC012615.1-201ENST00000565797 1299 ntBASIC17.13■□□□□ 0.33
CDKN2DP55273 AC099336.1-202ENST00000602961 463 ntBASIC17.13■□□□□ 0.33
CDKN2DP55273 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.13■□□□□ 0.33
CDKN2DP55273 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKN2DP55273 AC148477.5-201ENST00000625164 1645 ntBASIC17.13■□□□□ 0.33
CDKN2DP55273 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 OR6D1P-202ENST00000641007 5290 ntBASIC17.13■□□□□ 0.33
CDKN2DP55273 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKN2DP55273 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKN2DP55273 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDKN2DP55273 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKN2DP55273 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CDKN2DP55273 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKN2DP55273 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CDKN2DP55273 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2DP55273 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKN2DP55273 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDKN2DP55273 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
CDKN2DP55273 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDKN2DP55273 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CDKN2DP55273 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms