Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC098831.1-202ENST00000438821 336 ntBASIC18.4■□□□□ 0.54
CACNA2D1P54289 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 SIGLEC30P-201ENST00000455569 941 ntBASIC18.4■□□□□ 0.54
CACNA2D1P54289 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 AF228730.7-201ENST00000641842 219 ntBASIC18.4■□□□□ 0.54
CACNA2D1P54289 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D1P54289 LYSMD4-203ENST00000378904 2122 ntBASIC18.4■□□□□ 0.54
CACNA2D1P54289 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CACNA2D1P54289 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
CACNA2D1P54289 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CACNA2D1P54289 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.39■□□□□ 0.54
CACNA2D1P54289 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CACNA2D1P54289 AL139384.1-201ENST00000612143 3047 ntBASIC18.39■□□□□ 0.54
CACNA2D1P54289 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.39■□□□□ 0.54
CACNA2D1P54289 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D1P54289 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D1P54289 RPS2P28-201ENST00000314255 741 ntBASIC18.39■□□□□ 0.53
CACNA2D1P54289 MYCLP1-201ENST00000372451 1075 ntBASIC18.39■□□□□ 0.53
CACNA2D1P54289 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D1P54289 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 AC093909.1-201ENST00000504731 1122 ntBASIC18.39■□□□□ 0.53
CACNA2D1P54289 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 AL139327.4-201ENST00000612362 153 ntBASIC18.39■□□□□ 0.53
CACNA2D1P54289 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D1P54289 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D1P54289 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D1P54289 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CACNA2D1P54289 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D1P54289 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 AC133963.1-201ENST00000504166 1679 ntBASIC18.38■□□□□ 0.53
CACNA2D1P54289 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 ELK2BP-201ENST00000415014 1224 ntBASIC18.38■□□□□ 0.53
CACNA2D1P54289 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 AC105339.3-201ENST00000560043 636 ntBASIC18.38■□□□□ 0.53
CACNA2D1P54289 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 AL589182.2-201ENST00000619332 1049 ntBASIC18.38■□□□□ 0.53
CACNA2D1P54289 AC004706.3-202ENST00000621574 984 ntBASIC18.38■□□□□ 0.53
CACNA2D1P54289 AC117500.6-201ENST00000624871 588 ntBASIC18.38■□□□□ 0.53
CACNA2D1P54289 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 AC097637.2-201ENST00000624096 1997 ntBASIC18.38■□□□□ 0.53
CACNA2D1P54289 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CACNA2D1P54289 AC006504.4-201ENST00000592118 1568 ntBASIC18.38■□□□□ 0.53
CACNA2D1P54289 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D1P54289 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms