Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
ACLYP53396 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
ACLYP53396 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ACLYP53396 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ACLYP53396 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACLYP53396 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACLYP53396 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.99■□□□□ 0.63
ACLYP53396 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.99■□□□□ 0.63
ACLYP53396 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.99■□□□□ 0.63
ACLYP53396 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
ACLYP53396 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ACLYP53396 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.98■□□□□ 0.63
ACLYP53396 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ACLYP53396 AC008677.1-201ENST00000519230 1561 ntBASIC18.98■□□□□ 0.63
ACLYP53396 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
ACLYP53396 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.98■□□□□ 0.63
ACLYP53396 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.98■□□□□ 0.63
ACLYP53396 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.98■□□□□ 0.63
ACLYP53396 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.98■□□□□ 0.63
ACLYP53396 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.98■□□□□ 0.63
ACLYP53396 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 KRT8P23-201ENST00000560090 1207 ntBASIC18.98■□□□□ 0.63
ACLYP53396 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.98■□□□□ 0.63
ACLYP53396 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.98■□□□□ 0.63
ACLYP53396 AL390754.1-201ENST00000619088 582 ntBASIC18.98■□□□□ 0.63
ACLYP53396 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 UXT-AS1-201ENST00000590504 1525 ntBASIC18.98■□□□□ 0.63
ACLYP53396 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.98■□□□□ 0.63
ACLYP53396 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ACLYP53396 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ACLYP53396 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.98■□□□□ 0.63
ACLYP53396 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ACLYP53396 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ACLYP53396 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ACLYP53396 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ACLYP53396 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ACLYP53396 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ACLYP53396 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ACLYP53396 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ACLYP53396 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.97■□□□□ 0.63
ACLYP53396 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.97■□□□□ 0.63
ACLYP53396 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.97■□□□□ 0.63
ACLYP53396 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.97■□□□□ 0.63
ACLYP53396 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.97■□□□□ 0.63
ACLYP53396 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.97■□□□□ 0.63
ACLYP53396 SPDYE14P-201ENST00000442619 822 ntBASIC18.97■□□□□ 0.63
ACLYP53396 FAM207CP-201ENST00000443486 507 ntBASIC18.97■□□□□ 0.63
ACLYP53396 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.97■□□□□ 0.63
ACLYP53396 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.97■□□□□ 0.63
ACLYP53396 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ACLYP53396 SLC25A39P2-201ENST00000537614 270 ntBASIC18.97■□□□□ 0.63
ACLYP53396 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.97■□□□□ 0.63
ACLYP53396 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.97■□□□□ 0.63
ACLYP53396 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ACLYP53396 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.97■□□□□ 0.63
ACLYP53396 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ACLYP53396 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ACLYP53396 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ACLYP53396 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.97■□□□□ 0.63
ACLYP53396 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ACLYP53396 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.97■□□□□ 0.63
ACLYP53396 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ACLYP53396 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ACLYP53396 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
ACLYP53396 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.96■□□□□ 0.63
ACLYP53396 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ACLYP53396 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ACLYP53396 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.96■□□□□ 0.63
ACLYP53396 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ACLYP53396 IGHV3-42-201ENST00000520410 361 ntBASIC18.96■□□□□ 0.63
ACLYP53396 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.96■□□□□ 0.63
ACLYP53396 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ACLYP53396 LINC02560-201ENST00000596379 459 ntBASIC18.96■□□□□ 0.63
ACLYP53396 AL009183.1-201ENST00000603760 355 ntBASIC18.96■□□□□ 0.63
ACLYP53396 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.96■□□□□ 0.63
ACLYP53396 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ACLYP53396 AC008761.3-201ENST00000624803 892 ntBASIC18.96■□□□□ 0.63
ACLYP53396 AC084121.4-201ENST00000641598 221 ntBASIC18.96■□□□□ 0.63
ACLYP53396 AF228730.8-201ENST00000642140 221 ntBASIC18.96■□□□□ 0.63
ACLYP53396 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ACLYP53396 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.96■□□□□ 0.63
ACLYP53396 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
ACLYP53396 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ACLYP53396 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms