Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.32■□□□□ 0.04
CCR9P51686 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 MIR662-201ENST00000384847 95 ntBASIC15.32■□□□□ 0.04
CCR9P51686 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 AL441883.1-201ENST00000566170 1045 ntBASIC15.32■□□□□ 0.04
CCR9P51686 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCR9P51686 GPR32P1-201ENST00000601788 811 ntBASIC15.32■□□□□ 0.04
CCR9P51686 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
CCR9P51686 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.32■□□□□ 0.04
CCR9P51686 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCR9P51686 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.32■□□□□ 0.04
CCR9P51686 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CCR9P51686 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCR9P51686 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.31■□□□□ 0.04
CCR9P51686 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.31■□□□□ 0.04
CCR9P51686 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CCR9P51686 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.31■□□□□ 0.04
CCR9P51686 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.31■□□□□ 0.04
CCR9P51686 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.31■□□□□ 0.04
CCR9P51686 SLC25A1P3-201ENST00000395415 828 ntBASIC15.31■□□□□ 0.04
CCR9P51686 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 SPDYE15P-201ENST00000424157 909 ntBASIC15.31■□□□□ 0.04
CCR9P51686 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.31■□□□□ 0.04
CCR9P51686 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.31■□□□□ 0.04
CCR9P51686 SLC25A3P1-201ENST00000443844 931 ntBASIC15.31■□□□□ 0.04
CCR9P51686 ZNF444P1-201ENST00000559497 298 ntBASIC15.31■□□□□ 0.04
CCR9P51686 PCDHA1-201ENST00000378133 2726 ntBASIC15.31■□□□□ 0.04
CCR9P51686 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCR9P51686 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CCR9P51686 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CCR9P51686 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.31■□□□□ 0.04
CCR9P51686 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.31■□□□□ 0.04
CCR9P51686 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCR9P51686 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 FER1L4-210ENST00000615531 5998 ntBASIC15.3■□□□□ 0.04
CCR9P51686 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.3■□□□□ 0.04
CCR9P51686 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCR9P51686 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCR9P51686 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.3■□□□□ 0.04
CCR9P51686 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.3■□□□□ 0.04
CCR9P51686 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.3■□□□□ 0.04
CCR9P51686 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.3■□□□□ 0.04
CCR9P51686 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.3■□□□□ 0.04
CCR9P51686 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 AC008741.2-201ENST00000612792 3115 ntBASIC15.3■□□□□ 0.04
CCR9P51686 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCR9P51686 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms