Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.41■□□□□ 0.54
BRCC3P46736 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.41■□□□□ 0.54
BRCC3P46736 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.41■□□□□ 0.54
BRCC3P46736 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRCC3P46736 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRCC3P46736 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BRCC3P46736 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
BRCC3P46736 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRCC3P46736 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BRCC3P46736 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.41■□□□□ 0.54
BRCC3P46736 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.41■□□□□ 0.54
BRCC3P46736 AC096734.2-201ENST00000562054 433 ntBASIC18.41■□□□□ 0.54
BRCC3P46736 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.41■□□□□ 0.54
BRCC3P46736 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.41■□□□□ 0.54
BRCC3P46736 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRCC3P46736 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
BRCC3P46736 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.41■□□□□ 0.54
BRCC3P46736 BCAR1-209ENST00000546196 1340 ntBASIC18.41■□□□□ 0.54
BRCC3P46736 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
BRCC3P46736 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRCC3P46736 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
BRCC3P46736 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BRCC3P46736 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BRCC3P46736 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
BRCC3P46736 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRCC3P46736 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.4■□□□□ 0.54
BRCC3P46736 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCC3P46736 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCC3P46736 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRCC3P46736 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.4■□□□□ 0.54
BRCC3P46736 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCC3P46736 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BRCC3P46736 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.4■□□□□ 0.54
BRCC3P46736 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.4■□□□□ 0.54
BRCC3P46736 AC092183.1-201ENST00000469884 875 ntBASIC18.4■□□□□ 0.54
BRCC3P46736 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.4■□□□□ 0.54
BRCC3P46736 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.4■□□□□ 0.54
BRCC3P46736 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
BRCC3P46736 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
BRCC3P46736 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.4■□□□□ 0.54
BRCC3P46736 AC134684.3-201ENST00000641758 218 ntBASIC18.4■□□□□ 0.54
BRCC3P46736 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCC3P46736 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BRCC3P46736 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.4■□□□□ 0.54
BRCC3P46736 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCC3P46736 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BRCC3P46736 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BRCC3P46736 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BRCC3P46736 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
BRCC3P46736 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.39■□□□□ 0.54
BRCC3P46736 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
BRCC3P46736 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BRCC3P46736 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
BRCC3P46736 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BRCC3P46736 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BRCC3P46736 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
BRCC3P46736 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
BRCC3P46736 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
BRCC3P46736 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BRCC3P46736 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.39■□□□□ 0.53
BRCC3P46736 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BRCC3P46736 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.39■□□□□ 0.53
BRCC3P46736 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
BRCC3P46736 RHOQP3-201ENST00000437982 621 ntBASIC18.39■□□□□ 0.53
BRCC3P46736 PAWRP1-201ENST00000451083 565 ntBASIC18.39■□□□□ 0.53
BRCC3P46736 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.39■□□□□ 0.53
BRCC3P46736 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.39■□□□□ 0.53
BRCC3P46736 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.39■□□□□ 0.53
BRCC3P46736 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.39■□□□□ 0.53
BRCC3P46736 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
BRCC3P46736 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
BRCC3P46736 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
BRCC3P46736 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRCC3P46736 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.38■□□□□ 0.53
BRCC3P46736 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCC3P46736 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BRCC3P46736 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
BRCC3P46736 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
BRCC3P46736 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.38■□□□□ 0.53
BRCC3P46736 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCC3P46736 AC004967.1-201ENST00000453589 447 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms