Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCNFP41002 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNFP41002 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNFP41002 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.49■□□□□ 0.39
CCNFP41002 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCNFP41002 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCNFP41002 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNFP41002 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNFP41002 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCNFP41002 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCNFP41002 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCNFP41002 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.49■□□□□ 0.39
CCNFP41002 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.48■□□□□ 0.39
CCNFP41002 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.48■□□□□ 0.39
CCNFP41002 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCNFP41002 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCNFP41002 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.48■□□□□ 0.39
CCNFP41002 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 MTCL1P1-201ENST00000446207 792 ntBASIC17.48■□□□□ 0.39
CCNFP41002 TSSC2-201ENST00000450217 709 ntBASIC17.48■□□□□ 0.39
CCNFP41002 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.48■□□□□ 0.39
CCNFP41002 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.48■□□□□ 0.39
CCNFP41002 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.48■□□□□ 0.39
CCNFP41002 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCNFP41002 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCNFP41002 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CCNFP41002 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCNFP41002 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.47■□□□□ 0.39
CCNFP41002 RN7SL606P-201ENST00000472779 293 ntBASIC17.47■□□□□ 0.39
CCNFP41002 AC002558.1-201ENST00000488906 803 ntBASIC17.47■□□□□ 0.39
CCNFP41002 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.47■□□□□ 0.39
CCNFP41002 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.47■□□□□ 0.39
CCNFP41002 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCNFP41002 AC069148.1-201ENST00000608741 768 ntBASIC17.47■□□□□ 0.39
CCNFP41002 AL592071.1-201ENST00000611956 408 ntBASIC17.47■□□□□ 0.39
CCNFP41002 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 AC016734.2-201ENST00000624325 1377 ntBASIC17.47■□□□□ 0.39
CCNFP41002 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
CCNFP41002 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.47■□□□□ 0.39
CCNFP41002 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCNFP41002 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCNFP41002 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.46■□□□□ 0.39
CCNFP41002 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CCNFP41002 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCNFP41002 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.46■□□□□ 0.39
CCNFP41002 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.46■□□□□ 0.39
CCNFP41002 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCNFP41002 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms