Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HOXA13P31271 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA13P31271 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HOXA13P31271 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HOXA13P31271 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
HOXA13P31271 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HOXA13P31271 AC023274.1-201ENST00000418278 595 ntBASIC19.72■□□□□ 0.75
HOXA13P31271 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA13P31271 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA13P31271 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXA13P31271 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA13P31271 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXA13P31271 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXA13P31271 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA13P31271 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA13P31271 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA13P31271 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HOXA13P31271 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HOXA13P31271 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXA13P31271 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXA13P31271 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 KRT18P13-201ENST00000400056 1290 ntBASIC19.71■□□□□ 0.75
HOXA13P31271 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXA13P31271 CRYGEP-201ENST00000412192 528 ntBASIC19.71■□□□□ 0.75
HOXA13P31271 BX842568.4-201ENST00000421222 227 ntBASIC19.71■□□□□ 0.75
HOXA13P31271 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXA13P31271 VN2R19P-201ENST00000442399 1052 ntBASIC19.71■□□□□ 0.75
HOXA13P31271 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.71■□□□□ 0.75
HOXA13P31271 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXA13P31271 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXA13P31271 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HOXA13P31271 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HOXA13P31271 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HOXA13P31271 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA13P31271 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HOXA13P31271 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
HOXA13P31271 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HOXA13P31271 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HOXA13P31271 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA13P31271 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.7■□□□□ 0.74
HOXA13P31271 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA13P31271 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
HOXA13P31271 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA13P31271 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.7■□□□□ 0.74
HOXA13P31271 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 AC018845.2-201ENST00000568326 409 ntBASIC19.7■□□□□ 0.74
HOXA13P31271 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
HOXA13P31271 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HOXA13P31271 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HOXA13P31271 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
HOXA13P31271 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXA13P31271 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA13P31271 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA13P31271 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA13P31271 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HOXA13P31271 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA13P31271 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA13P31271 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA13P31271 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA13P31271 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA13P31271 MRPL20P1-201ENST00000400819 433 ntBASIC19.69■□□□□ 0.74
HOXA13P31271 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA13P31271 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA13P31271 HCG4B-203ENST00000450128 991 ntBASIC19.69■□□□□ 0.74
HOXA13P31271 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXA13P31271 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HOXA13P31271 OR7E47P-204ENST00000575924 449 ntBASIC19.69■□□□□ 0.74
HOXA13P31271 AC006538.3-201ENST00000612495 578 ntBASIC19.69■□□□□ 0.74
HOXA13P31271 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms