Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TSPY18P-201ENST00000441642 509 ntBASIC15.94■□□□□ 0.14
SHC1P29353 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SHC1P29353 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SHC1P29353 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.94■□□□□ 0.14
SHC1P29353 INTS4P1-201ENST00000438455 1935 ntBASIC15.94■□□□□ 0.14
SHC1P29353 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SHC1P29353 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.94■□□□□ 0.14
SHC1P29353 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHC1P29353 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SHC1P29353 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.93■□□□□ 0.14
SHC1P29353 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SHC1P29353 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.93■□□□□ 0.14
SHC1P29353 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 COX5BP2-201ENST00000392354 334 ntBASIC15.93■□□□□ 0.14
SHC1P29353 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.93■□□□□ 0.14
SHC1P29353 KRT18P31-201ENST00000506277 1292 ntBASIC15.93■□□□□ 0.14
SHC1P29353 UNC93B7-201ENST00000509439 705 ntBASIC15.93■□□□□ 0.14
SHC1P29353 MIR5100-201ENST00000579544 119 ntBASIC15.93■□□□□ 0.14
SHC1P29353 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.93■□□□□ 0.14
SHC1P29353 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SHC1P29353 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.93■□□□□ 0.14
SHC1P29353 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.93■□□□□ 0.14
SHC1P29353 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SHC1P29353 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
SHC1P29353 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SHC1P29353 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.93■□□□□ 0.14
SHC1P29353 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
SHC1P29353 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SHC1P29353 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHC1P29353 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
SHC1P29353 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SHC1P29353 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.92■□□□□ 0.14
SHC1P29353 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
SHC1P29353 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.92■□□□□ 0.14
SHC1P29353 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.92■□□□□ 0.14
SHC1P29353 POM121L3P-201ENST00000419331 1163 ntBASIC15.92■□□□□ 0.14
SHC1P29353 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.92■□□□□ 0.14
SHC1P29353 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.92■□□□□ 0.14
SHC1P29353 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.92■□□□□ 0.14
SHC1P29353 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.92■□□□□ 0.14
SHC1P29353 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.92■□□□□ 0.14
SHC1P29353 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.92■□□□□ 0.14
SHC1P29353 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.92■□□□□ 0.14
SHC1P29353 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SHC1P29353 AL118508.1-201ENST00000613502 2345 ntBASIC15.92■□□□□ 0.14
SHC1P29353 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.92■□□□□ 0.14
SHC1P29353 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.92■□□□□ 0.14
SHC1P29353 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.92■□□□□ 0.14
SHC1P29353 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.92■□□□□ 0.14
SHC1P29353 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SHC1P29353 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SHC1P29353 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.92■□□□□ 0.14
SHC1P29353 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.92■□□□□ 0.14
SHC1P29353 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHC1P29353 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SHC1P29353 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms