Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN6P29350 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN6P29350 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
PTPN6P29350 AC007967.3-201ENST00000434308 558 ntBASIC16.48■□□□□ 0.23
PTPN6P29350 DRAXINP1-201ENST00000437611 948 ntBASIC16.48■□□□□ 0.23
PTPN6P29350 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 RN7SL606P-201ENST00000472779 293 ntBASIC16.48■□□□□ 0.23
PTPN6P29350 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN6P29350 AL592071.1-201ENST00000611956 408 ntBASIC16.48■□□□□ 0.23
PTPN6P29350 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.48■□□□□ 0.23
PTPN6P29350 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PTPN6P29350 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PTPN6P29350 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PTPN6P29350 PCDHA14-201ENST00000506751 2298 ntBASIC16.48■□□□□ 0.23
PTPN6P29350 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN6P29350 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PTPN6P29350 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 PCDHB19P-201ENST00000570871 2371 ntBASIC16.47■□□□□ 0.23
PTPN6P29350 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.47■□□□□ 0.23
PTPN6P29350 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.47■□□□□ 0.23
PTPN6P29350 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.47■□□□□ 0.23
PTPN6P29350 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN6P29350 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN6P29350 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN6P29350 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN6P29350 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN6P29350 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN6P29350 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
PTPN6P29350 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PTPN6P29350 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN6P29350 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN6P29350 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN6P29350 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN6P29350 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PTPN6P29350 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN6P29350 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN6P29350 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN6P29350 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN6P29350 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.46■□□□□ 0.23
PTPN6P29350 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 AC124864.1-201ENST00000623408 392 ntBASIC16.46■□□□□ 0.23
PTPN6P29350 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN6P29350 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PTPN6P29350 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN6P29350 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN6P29350 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
PTPN6P29350 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms