Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HTR1BP28222 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
HTR1BP28222 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HTR1BP28222 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.31■□□□□ 0.36
HTR1BP28222 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HTR1BP28222 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HTR1BP28222 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HTR1BP28222 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 TNRC18P3-201ENST00000441896 2691 ntBASIC17.31■□□□□ 0.36
HTR1BP28222 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.31■□□□□ 0.36
HTR1BP28222 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HTR1BP28222 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HTR1BP28222 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.31■□□□□ 0.36
HTR1BP28222 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.31■□□□□ 0.36
HTR1BP28222 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HTR1BP28222 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.31■□□□□ 0.36
HTR1BP28222 AC098831.1-202ENST00000438821 336 ntBASIC17.31■□□□□ 0.36
HTR1BP28222 IGHV3-22-201ENST00000520721 359 ntBASIC17.31■□□□□ 0.36
HTR1BP28222 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.31■□□□□ 0.36
HTR1BP28222 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.31■□□□□ 0.36
HTR1BP28222 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.31■□□□□ 0.36
HTR1BP28222 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.31■□□□□ 0.36
HTR1BP28222 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.31■□□□□ 0.36
HTR1BP28222 AC012640.2-201ENST00000561606 901 ntBASIC17.31■□□□□ 0.36
HTR1BP28222 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.31■□□□□ 0.36
HTR1BP28222 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.31■□□□□ 0.36
HTR1BP28222 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
HTR1BP28222 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.31■□□□□ 0.36
HTR1BP28222 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HTR1BP28222 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
HTR1BP28222 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HTR1BP28222 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1BP28222 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HTR1BP28222 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HTR1BP28222 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HTR1BP28222 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.3■□□□□ 0.36
HTR1BP28222 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HTR1BP28222 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.3■□□□□ 0.36
HTR1BP28222 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.3■□□□□ 0.36
HTR1BP28222 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.3■□□□□ 0.36
HTR1BP28222 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.3■□□□□ 0.36
HTR1BP28222 AC145285.3-201ENST00000564603 959 ntBASIC17.3■□□□□ 0.36
HTR1BP28222 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.3■□□□□ 0.36
HTR1BP28222 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.3■□□□□ 0.36
HTR1BP28222 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.3■□□□□ 0.36
HTR1BP28222 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.3■□□□□ 0.36
HTR1BP28222 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.3■□□□□ 0.36
HTR1BP28222 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.3■□□□□ 0.36
HTR1BP28222 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
HTR1BP28222 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1BP28222 AC104109.2-201ENST00000602919 1418 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms