Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP11P24347 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP11P24347 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP11P24347 SIGLEC16-201ENST00000599858 1437 ntBASIC16.5■□□□□ 0.23
MMP11P24347 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MMP11P24347 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP11P24347 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP11P24347 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP11P24347 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP11P24347 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP11P24347 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.5■□□□□ 0.23
MMP11P24347 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP11P24347 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP11P24347 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP11P24347 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP11P24347 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP11P24347 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP11P24347 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MMP11P24347 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MMP11P24347 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP11P24347 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MMP11P24347 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
MMP11P24347 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MMP11P24347 LAGE3P1-201ENST00000425356 484 ntBASIC16.49■□□□□ 0.23
MMP11P24347 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP11P24347 PRYP5-201ENST00000451909 266 ntBASIC16.49■□□□□ 0.23
MMP11P24347 BX005266.1-201ENST00000473402 457 ntBASIC16.49■□□□□ 0.23
MMP11P24347 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 IGHV3-22-201ENST00000520721 359 ntBASIC16.49■□□□□ 0.23
MMP11P24347 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP11P24347 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP11P24347 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP11P24347 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP11P24347 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MMP11P24347 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
MMP11P24347 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP11P24347 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 AC100803.2-201ENST00000562459 1963 ntBASIC16.48■□□□□ 0.23
MMP11P24347 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP11P24347 SPDYE21P-201ENST00000413323 827 ntBASIC16.48■□□□□ 0.23
MMP11P24347 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 AC092910.1-201ENST00000482027 1129 ntBASIC16.48■□□□□ 0.23
MMP11P24347 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP11P24347 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP11P24347 AC105339.3-201ENST00000560043 636 ntBASIC16.48■□□□□ 0.23
MMP11P24347 AC145285.3-201ENST00000564603 959 ntBASIC16.48■□□□□ 0.23
MMP11P24347 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.48■□□□□ 0.23
MMP11P24347 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP11P24347 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP11P24347 AC073592.5-201ENST00000624854 528 ntBASIC16.48■□□□□ 0.23
MMP11P24347 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 AC099398.1-201ENST00000567919 2776 ntBASIC16.48■□□□□ 0.23
MMP11P24347 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP11P24347 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 AL353593.2-201ENST00000602529 1483 ntBASIC16.48■□□□□ 0.23
MMP11P24347 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP11P24347 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP11P24347 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP11P24347 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
MMP11P24347 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP11P24347 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP11P24347 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP11P24347 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP11P24347 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP11P24347 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP11P24347 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP11P24347 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MMP11P24347 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP11P24347 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP11P24347 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms