Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRM3P20309 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRM3P20309 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRM3P20309 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRM3P20309 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHRM3P20309 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 KRT8P10-201ENST00000450021 1447 ntBASIC17.3■□□□□ 0.36
CHRM3P20309 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CHRM3P20309 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHRM3P20309 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRM3P20309 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRM3P20309 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CHRM3P20309 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRM3P20309 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRM3P20309 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRM3P20309 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRM3P20309 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRM3P20309 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.3■□□□□ 0.36
CHRM3P20309 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRM3P20309 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRM3P20309 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRM3P20309 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRM3P20309 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRM3P20309 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHRM3P20309 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRM3P20309 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRM3P20309 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHRM3P20309 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRM3P20309 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRM3P20309 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRM3P20309 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CHRM3P20309 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRM3P20309 UPK3BP1-201ENST00000428678 509 ntBASIC17.29■□□□□ 0.36
CHRM3P20309 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRM3P20309 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHRM3P20309 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRM3P20309 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.29■□□□□ 0.36
CHRM3P20309 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.29■□□□□ 0.36
CHRM3P20309 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 BNIP3P18-201ENST00000593976 575 ntBASIC17.29■□□□□ 0.36
CHRM3P20309 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.29■□□□□ 0.36
CHRM3P20309 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHRM3P20309 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRM3P20309 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHRM3P20309 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRM3P20309 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRM3P20309 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRM3P20309 AD000864.1-201ENST00000624076 2295 ntBASIC17.28■□□□□ 0.36
CHRM3P20309 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRM3P20309 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRM3P20309 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRM3P20309 AP001094.4-201ENST00000579008 2176 ntBASIC17.28■□□□□ 0.36
CHRM3P20309 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRM3P20309 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRM3P20309 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms