Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC130P13994 AC092910.1-201ENST00000482027 1129 ntBASIC18.38■□□□□ 0.53
CCDC130P13994 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC130P13994 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC130P13994 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CCDC130P13994 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC130P13994 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC130P13994 AC116407.3-201ENST00000623905 1129 ntBASIC18.38■□□□□ 0.53
CCDC130P13994 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC130P13994 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC130P13994 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC130P13994 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC130P13994 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC130P13994 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC130P13994 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC130P13994 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC130P13994 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC130P13994 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC130P13994 CROCCP2-202ENST00000412962 2773 ntBASIC18.37■□□□□ 0.53
CCDC130P13994 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CCDC130P13994 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC130P13994 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC130P13994 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 RPS2P28-201ENST00000314255 741 ntBASIC18.37■□□□□ 0.53
CCDC130P13994 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC130P13994 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC130P13994 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC130P13994 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC130P13994 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC130P13994 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC130P13994 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC130P13994 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC130P13994 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.37■□□□□ 0.53
CCDC130P13994 AC004706.3-202ENST00000621574 984 ntBASIC18.37■□□□□ 0.53
CCDC130P13994 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC130P13994 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC130P13994 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC130P13994 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC130P13994 AC006504.4-201ENST00000592118 1568 ntBASIC18.37■□□□□ 0.53
CCDC130P13994 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC130P13994 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC130P13994 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC130P13994 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC130P13994 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC130P13994 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC130P13994 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC130P13994 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC130P13994 KRT18P27-201ENST00000427733 1299 ntBASIC18.36■□□□□ 0.53
CCDC130P13994 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC130P13994 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC130P13994 AC093909.1-201ENST00000504731 1122 ntBASIC18.36■□□□□ 0.53
CCDC130P13994 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC130P13994 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 AC105339.3-201ENST00000560043 636 ntBASIC18.36■□□□□ 0.53
CCDC130P13994 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC130P13994 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC130P13994 AC006557.2-201ENST00000592985 1240 ntBASIC18.36■□□□□ 0.53
CCDC130P13994 AL139424.1-201ENST00000607572 797 ntBASIC18.36■□□□□ 0.53
CCDC130P13994 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC130P13994 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.36■□□□□ 0.53
CCDC130P13994 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC130P13994 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC130P13994 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC130P13994 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC130P13994 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC130P13994 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC130P13994 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC130P13994 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC130P13994 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC130P13994 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC130P13994 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC130P13994 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC130P13994 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms