Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
PCNAP12004 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCNAP12004 AL445228.2-201ENST00000605589 952 ntBASIC16.95■□□□□ 0.3
PCNAP12004 AC010331.1-201ENST00000611423 582 ntBASIC16.95■□□□□ 0.3
PCNAP12004 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.95■□□□□ 0.3
PCNAP12004 AL358472.4-201ENST00000633140 710 ntBASIC16.95■□□□□ 0.3
PCNAP12004 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCNAP12004 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 AC125634.1-201ENST00000438758 1403 ntBASIC16.95■□□□□ 0.3
PCNAP12004 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.95■□□□□ 0.3
PCNAP12004 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCNAP12004 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
PCNAP12004 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCNAP12004 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
PCNAP12004 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCNAP12004 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 COX5BP2-201ENST00000392354 334 ntBASIC16.94■□□□□ 0.3
PCNAP12004 MIR1224-201ENST00000408193 85 ntBASIC16.94■□□□□ 0.3
PCNAP12004 AC091607.1-201ENST00000490318 1060 ntBASIC16.94■□□□□ 0.3
PCNAP12004 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.94■□□□□ 0.3
PCNAP12004 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.94■□□□□ 0.3
PCNAP12004 AP000550.4-202ENST00000639755 178 ntBASIC16.94■□□□□ 0.3
PCNAP12004 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCNAP12004 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCNAP12004 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCNAP12004 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.93■□□□□ 0.3
PCNAP12004 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.93■□□□□ 0.3
PCNAP12004 AC008894.3-201ENST00000624324 3103 ntBASIC16.93■□□□□ 0.3
PCNAP12004 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.93■□□□□ 0.3
PCNAP12004 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCNAP12004 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCNAP12004 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.93■□□□□ 0.3
PCNAP12004 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.93■□□□□ 0.3
PCNAP12004 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.93■□□□□ 0.3
PCNAP12004 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.93■□□□□ 0.3
PCNAP12004 AP002414.4-201ENST00000589764 1148 ntBASIC16.93■□□□□ 0.3
PCNAP12004 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCNAP12004 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.93■□□□□ 0.3
PCNAP12004 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCNAP12004 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCNAP12004 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCNAP12004 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCNAP12004 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
PCNAP12004 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.93■□□□□ 0.3
PCNAP12004 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCNAP12004 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCNAP12004 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCNAP12004 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms