Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AC074386.1-202ENST00000463561 864 ntBASIC12.79□□□□□ -0.36
NHLRC4P0CG21 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AL031432.2-201ENST00000566714 459 ntBASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AL928711.1-201ENST00000570165 459 ntBASIC12.79□□□□□ -0.36
NHLRC4P0CG21 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AL353135.1-201ENST00000606729 504 ntBASIC12.79□□□□□ -0.36
NHLRC4P0CG21 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AC093028.1-201ENST00000622998 982 ntBASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AC004877.2-201ENST00000623941 599 ntBASIC12.79□□□□□ -0.36
NHLRC4P0CG21 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
NHLRC4P0CG21 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 ELK2BP-201ENST00000415014 1224 ntBASIC12.78□□□□□ -0.36
NHLRC4P0CG21 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 PAWRP1-201ENST00000451083 565 ntBASIC12.78□□□□□ -0.36
NHLRC4P0CG21 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 AC004817.3-201ENST00000602957 2129 ntBASIC12.78□□□□□ -0.36
NHLRC4P0CG21 AC027612.4-201ENST00000605371 583 ntBASIC12.78□□□□□ -0.36
NHLRC4P0CG21 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 BCAR1-209ENST00000546196 1340 ntBASIC12.78□□□□□ -0.36
NHLRC4P0CG21 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 AL353593.2-201ENST00000602529 1483 ntBASIC12.78□□□□□ -0.36
NHLRC4P0CG21 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NHLRC4P0CG21 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NHLRC4P0CG21 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NHLRC4P0CG21 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NHLRC4P0CG21 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NHLRC4P0CG21 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NHLRC4P0CG21 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NHLRC4P0CG21 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
NHLRC4P0CG21 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.77□□□□□ -0.36
NHLRC4P0CG21 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
NHLRC4P0CG21 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NHLRC4P0CG21 AC009113.1-201ENST00000570267 2443 ntBASIC12.77□□□□□ -0.37
NHLRC4P0CG21 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NHLRC4P0CG21 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NHLRC4P0CG21 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.77□□□□□ -0.37
NHLRC4P0CG21 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NHLRC4P0CG21 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NHLRC4P0CG21 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.77□□□□□ -0.37
NHLRC4P0CG21 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
NHLRC4P0CG21 COX5BP2-201ENST00000392354 334 ntBASIC12.77□□□□□ -0.37
NHLRC4P0CG21 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.77□□□□□ -0.37
NHLRC4P0CG21 FAM58CP-201ENST00000435741 640 ntBASIC12.77□□□□□ -0.37
NHLRC4P0CG21 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms