Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 AC011498.5-201ENST00000592027 486 ntBASIC18.8■□□□□ 0.6
CCDC172P0C7W6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 AL592071.1-201ENST00000611956 408 ntBASIC18.8■□□□□ 0.6
CCDC172P0C7W6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 AC125634.1-201ENST00000438758 1403 ntBASIC18.8■□□□□ 0.6
CCDC172P0C7W6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC172P0C7W6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 KRT8P26-201ENST00000534154 1276 ntBASIC18.79■□□□□ 0.6
CCDC172P0C7W6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC172P0C7W6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 FAM220CP-201ENST00000395253 831 ntBASIC18.78■□□□□ 0.6
CCDC172P0C7W6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 RN7SL850P-201ENST00000579959 291 ntBASIC18.78■□□□□ 0.6
CCDC172P0C7W6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC172P0C7W6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms