Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DOAP06340 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-DOAP06340 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-DOAP06340 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DOAP06340 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HLA-DOAP06340 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DOAP06340 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 AC133963.1-201ENST00000504166 1679 ntBASIC20.38■□□□□ 0.85
HLA-DOAP06340 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 AL355312.1-201ENST00000407115 2176 ntBASIC20.38■□□□□ 0.85
HLA-DOAP06340 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DOAP06340 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
HLA-DOAP06340 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 AC074386.1-202ENST00000463561 864 ntBASIC20.37■□□□□ 0.85
HLA-DOAP06340 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HLA-DOAP06340 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DOAP06340 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 AC087163.2-201ENST00000457299 853 ntBASIC20.36■□□□□ 0.85
HLA-DOAP06340 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HLA-DOAP06340 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DOAP06340 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DOAP06340 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.35■□□□□ 0.85
HLA-DOAP06340 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HLA-DOAP06340 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DOAP06340 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms