Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.84■□□□□ 0.93
APPP05067 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
APPP05067 PRYP5-201ENST00000451909 266 ntBASIC20.84■□□□□ 0.93
APPP05067 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 OR7E14P-202ENST00000530490 1290 ntBASIC20.84■□□□□ 0.93
APPP05067 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.84■□□□□ 0.93
APPP05067 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.84■□□□□ 0.93
APPP05067 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.84■□□□□ 0.93
APPP05067 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.84■□□□□ 0.93
APPP05067 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
APPP05067 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
APPP05067 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.83■□□□□ 0.93
APPP05067 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
APPP05067 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
APPP05067 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.83■□□□□ 0.93
APPP05067 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.83■□□□□ 0.93
APPP05067 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
APPP05067 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APPP05067 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
APPP05067 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.83■□□□□ 0.93
APPP05067 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
APPP05067 AL031284.1-201ENST00000419297 478 ntBASIC20.83■□□□□ 0.93
APPP05067 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
APPP05067 AC018712.1-201ENST00000455767 687 ntBASIC20.83■□□□□ 0.93
APPP05067 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.83■□□□□ 0.93
APPP05067 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.83■□□□□ 0.93
APPP05067 AP001005.1-201ENST00000571755 1248 ntBASIC20.83■□□□□ 0.93
APPP05067 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.83■□□□□ 0.93
APPP05067 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
APPP05067 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
APPP05067 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
APPP05067 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.83■□□□□ 0.92
APPP05067 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
APPP05067 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
APPP05067 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
APPP05067 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
APPP05067 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.83■□□□□ 0.92
APPP05067 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
APPP05067 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
APPP05067 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
APPP05067 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
APPP05067 HLA-A-201ENST00000376802 1334 ntBASIC20.82■□□□□ 0.92
APPP05067 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
APPP05067 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
APPP05067 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.82■□□□□ 0.92
APPP05067 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.82■□□□□ 0.92
APPP05067 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
APPP05067 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.82■□□□□ 0.92
APPP05067 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.82■□□□□ 0.92
APPP05067 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.82■□□□□ 0.92
APPP05067 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.82■□□□□ 0.92
APPP05067 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.82■□□□□ 0.92
APPP05067 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.82■□□□□ 0.92
APPP05067 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.82■□□□□ 0.92
APPP05067 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.82■□□□□ 0.92
APPP05067 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
APPP05067 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.82■□□□□ 0.92
APPP05067 AC097637.2-201ENST00000624096 1997 ntBASIC20.82■□□□□ 0.92
APPP05067 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.82■□□□□ 0.92
APPP05067 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.82■□□□□ 0.92
APPP05067 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
APPP05067 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
APPP05067 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.82■□□□□ 0.92
APPP05067 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
APPP05067 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.81■□□□□ 0.92
APPP05067 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
APPP05067 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
APPP05067 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 RPS2P28-201ENST00000314255 741 ntBASIC20.81■□□□□ 0.92
APPP05067 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
APPP05067 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms