Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.29■□□□□ 0.36
CAPNS1P04632 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CAPNS1P04632 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPNS1P04632 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CAPNS1P04632 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPNS1P04632 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPNS1P04632 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CAPNS1P04632 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CAPNS1P04632 AL357033.4-201ENST00000617703 1807 ntBASIC17.28■□□□□ 0.36
CAPNS1P04632 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.28■□□□□ 0.36
CAPNS1P04632 AL096828.2-201ENST00000567259 1965 ntBASIC17.28■□□□□ 0.36
CAPNS1P04632 RCC2P3-201ENST00000418112 1537 ntBASIC17.28■□□□□ 0.36
CAPNS1P04632 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CAPNS1P04632 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CAPNS1P04632 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 INTS4P1-201ENST00000438455 1935 ntBASIC17.28■□□□□ 0.36
CAPNS1P04632 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CAPNS1P04632 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.28■□□□□ 0.36
CAPNS1P04632 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPNS1P04632 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CAPNS1P04632 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CAPNS1P04632 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPNS1P04632 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.28■□□□□ 0.36
CAPNS1P04632 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPNS1P04632 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPNS1P04632 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CAPNS1P04632 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CAPNS1P04632 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPNS1P04632 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CAPNS1P04632 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPNS1P04632 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CAPNS1P04632 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPNS1P04632 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPNS1P04632 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPNS1P04632 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPNS1P04632 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPNS1P04632 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPNS1P04632 MIR770-201ENST00000390219 98 ntBASIC17.27■□□□□ 0.36
CAPNS1P04632 MCCD1P2-201ENST00000423228 335 ntBASIC17.27■□□□□ 0.36
CAPNS1P04632 AC007967.2-201ENST00000432613 625 ntBASIC17.27■□□□□ 0.36
CAPNS1P04632 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPNS1P04632 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPNS1P04632 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.27■□□□□ 0.36
CAPNS1P04632 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.27■□□□□ 0.36
CAPNS1P04632 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.27■□□□□ 0.36
CAPNS1P04632 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPNS1P04632 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.27■□□□□ 0.36
CAPNS1P04632 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.27■□□□□ 0.36
CAPNS1P04632 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPNS1P04632 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CAPNS1P04632 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CAPNS1P04632 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPNS1P04632 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
CAPNS1P04632 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPNS1P04632 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPNS1P04632 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPNS1P04632 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPNS1P04632 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CAPNS1P04632 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPNS1P04632 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPNS1P04632 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.27■□□□□ 0.35
CAPNS1P04632 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPNS1P04632 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.26■□□□□ 0.35
CAPNS1P04632 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPNS1P04632 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CAPNS1P04632 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPNS1P04632 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPNS1P04632 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPNS1P04632 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPNS1P04632 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPNS1P04632 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPNS1P04632 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPNS1P04632 AC254562.1-201ENST00000417586 456 ntBASIC17.26■□□□□ 0.35
CAPNS1P04632 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPNS1P04632 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPNS1P04632 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPNS1P04632 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPNS1P04632 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.26■□□□□ 0.35
CAPNS1P04632 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms